• Biosmilars_2
    Visiongain will be holding its 4th Biosimilars conference on November 11-13, 2008 in Philadelphia, PA.  The conference is intended to help attendees:

    • Identify the trends that will shape future market development of follow-on biologics;
    • Explore the current market and regulatory environment for biosimilars in Europe and the relevance to U.S. legislation;
    • Examine the emerging market landscape for biosimilars in India and China;
    • Understand interchangeability/substitutibility policies;
    • Discuss unwanted immunogenicity issues for biosimilars;
    • Analyze the market impact of biosimilars from the payers perception;
    • Examine the pre-marketing hurdles and post-marketing challenges faced by biosimilar/follow-on biologics developers;
    • Utilize new and established analytical tools for demonstrating comparability; and
    • Assess how is the landscape evolving for biosimilar medicines.

    In particular, Visiongain faculty will offer presentations on the following topics on November 12-13:

    • The biosimiliar threat:  Lessons learned from the European Union;
    • Biosimilars in the EU;
    • Examining the current legal and regulatory landscape for U.S. marketing of follow-on biologics;
    • What is a Generic Biopharmaceutical?  Biogeneric?  Biosimilar?  Follow-on Biologic?
    • Strategies for achieving the most effective patent protection;
    • The future role biosimilars can play in improving patient access to effective and affordable medicines;
    • The market for biosimilars: evolution and policy options;
    • Potential competition implications for generic biologics;
    • Examining the emerging market landscape for biosimilars in India;
    • Development of G-CSF biosimilar:  A win-win-win situation on three continents;
    • Biosimilar commercialization opportunities and challenges in the U.S.;
    • Understanding the regulatory framework surrounding the development of biosimilars;
    • The commercial implications of biosimilars:  The experience in Europe;
    • The next generation of biosimilars;
    • Understanding pricing and reimbursement issues; and
    • New and established analytical tools for demonstrating comparability.

    Visiongain_3
    In addition, a pre-conference interactive biosimilars workshop will be offered on November 11.  The agenda for the Biosimilars conference can be found here.  A complete brochure for this conference, including an agenda, list of speakers, and registration form can be downloaded here (free registration required).

    The registration fee ranges from £1299 ($1880) for the conference alone to £1699 ($2460) for the conference and workshop; the fee for attending the workshop alone is £599 ($867).  Academic discounts are available.  Those interested in registering for the conference can do so here.

  •     By Donald Zuhn

    Kotlikoff_laurence
    On Wednesday, Dr. Laurence J. Kotlikoff, a professor of economics at Boston University, released the results of his analysis of the impact of varying lengths of market exclusivity on innovation in the biotechnology sector.  The 20-page report, entitled "Stimulating Innovation in the Biologics Industry:  A Balanced Approach to Marketing Exclusivity," was funded by Teva Pharmaceuticals USA (see Teva press release).  Coinciding with the release of the report, Dr. Kotlikoff (at right) also conducted conference calls on Wednesday and Thursday to discuss the study.

    According to the report, innovation in the biotech sector would be best accomplished by providing innovators with the "appropriate degree" of "monopoly protection."  To distinguish between "appropriate" and "inappropriate" degrees of "monopoly protection," Dr. Kotlikoff examined the exclusivity provisions in the four follow-on biologics bills before Congress, and concluded that "three of the four bills contain exclusivity provisions that run the danger of overextending monopoly protection" and thus "paradoxically, undermine innovation and the bills’ own objectives."  Dr. Kotlikoff argues that the three bills contain "lengthy" exclusivity provisions which "not only greatly delay[] entry by competitors with low-cost alternatives, but also exclude[] other innovators from building — in a timely manner — on the stock of prior knowledge."  The report contends that Congress should look to the Hatch-Waxman model (which specifies exclusivity periods for chemical therapeutics) rather than adopt the exclusivity provisions in three of the follow-on biologics bills, each of which "would distort the market and undercut innovation."  In particular, Dr. Kotlikoff concludes that "[t]here are, quite simply, no compelling differences between the chemical-based and protein-based medication industries to justify deviating from a policy that has succeeded for over a quarter of a century in both dramatically reducing drug prices and stimulating innovation."

    Much of Dr. Kotlikoff’s analysis focuses on the exclusivity provisions in four follow-on biologics bills pending before Congress.  The bills include:  "Access to Life Saving Medicine Act," (S. 623 and H.R. 1038), introduced by Congressman Henry Waxman and Senator Charles Schumer in February 2007; "The Patient Protection and Innovative Biologic Medicines Act of 2007" (H.R. 1956), introduced by Congressman Jay Inslee in April 2007; "The Biologics Price Competition and Innovation Act of 2007" (S. 1695), introduced by Senator Edward Kennedy in June 2007; and "The Pathway for Biosimilars Act" (H.R. 5629), introduced by Congresswoman Anna Eshoo and Congressman Joseph Barton in March 2008.  Patent Docs has previously reported on both S. 1695 (see "Senate Committee Passes Biologics Legislation") and H.R. 5629 (see "New Follow-on Biologics Bill Introduced in the House").  With respect to their exclusivity provisions, Dr. Kotlikoff states that two of the four bills (H.R. 1956 and H.R. 5629) provide twelve years of data exclusivity followed by two years of approval or market exclusivity, one bill (S. 1695) provides four years of data exclusivity followed by eight years of approval exclusivity, and one bill (S. 623 and H.R. 1038) does not address data or approval exclusivity.  (Data exclusivity refers to the period of time during which a potential generic drug supplier is prevented from using an innovator’s clinical trial and related data to substantiate the safety of the generic’s medically equivalent drug, and approval or market exclusivity refers to the period of time during which a generic drug supplier can file for, but not receive, FDA approval.)  [UPDATE:  A reading of H.R. 5629 indicates that contrary to the
    report’s suggestion, this bill would provide a total of twelve years of
    exclusivity, of which four years would be data exclusivity.]

    While Dr. Kotlikoff believes that "providing data exclusivity is tantamount to the government simply doing away with patents altogether and conveying exclusive product marketing rights to favored companies by fiat," and therefore, that such provisions are "at considerable odds with the principles of free markets," he accepts the "limited" data and approval exclusivity periods provided under Hatch-Waxman (generally four years of data exclusivity and one year of approval exclusivity) because the Hatch-Waxman scheme has proven to be a success.  However, when Dr. Kotlikoff compared the effect of the follow-on biologics bills’ exclusivity provisions on the overall length of protection, he found that three of the bills produced exclusivity periods that differed significantly from those of Hatch-Waxman.  In particular, while the exclusivity periods of Hatch-Waxman and S. 623/H.R. 1038 would lengthen protection from the date of application filing by up to 25% (i.e., providing 25 years of protection instead of only 20 for non-drug inventions), S. 1695 would lengthen protection by up to 60% (32 years instead of 20), and H.R. 1956 and H.R. 5629 would lengthen protection by up to 85% (37 years instead of 20).  Dr. Kotlikoff questions the need for exclusivity provisions that would tack on an extra 7-12 years of protection — as compared with the provisions of Hatch-Waxman — when the average development time for new biological drugs has been shown to be only 7.4 months longer than that for new chemical drugs.

    The report provides much evidence that the Hatch-Waxman regulatory scheme has dramatically lowered drug prices while also ensuring strong incentives to innovate.  For example, Dr. Kotlikoff notes that while annual pharmaceutical research and development costs ranged from 8-10% of sales prior to Hatch-Waxman, such costs are now running between 16-18% of sales (see Figure 1 from report below). 

    Figure1_2

    He also notes that the number of new drug patents issued by the U.S. Patent and Trademark Office rose dramatically after Hatch-Waxman was passed in 1984, and has continued to exceed pre-1984 levels in each year since Hatch-Waxman was promulgated (see Figure 2 from report below).

    Figure2

    The report also questions two presumptions concerning "monopoly protection policy" and the drug industry: (1) that longer periods of monopoly protection promote innovation, and (2) that extending the duration of monopoly protection results in no overall economic loss.  With respect to the first presumption, Dr. Kotlikoff argues that longer exclusivity provisions lengthen the time between innovations and therefore reduce the pace of innovation rather than stimulate innovation.  According to Dr. Kotlikoff, once an invention has been made, the inventor’s main goal becomes protecting and marketing that invention, as opposed to developing a dramatically different and better version of the patented product — to do the latter would be to "diminish, if not vitiate, the value of the initial invention, which may have been undertaken at considerable cost."  In other words, "monopolists don’t innovate" because "bringing new products to the market undercuts a monopolist’s revenues on his existing products."  With respect to the second presumption, Dr. Kotlikoff argues that there is an overall economic loss because extended monopoly protection distorts consumer choice by maintaining artificially high prices of protected drugs, and these high prices in turn prevent uninsured and underinsured Americans from having access to effective biologic therapeutics.

    The report concludes that limiting, rather than lengthening, monopoly protection will stimulate innovation.  Dr. Kotlikoff argues that:

    [E]ach innovation is part of a chain.  Today’s innovation cannot proceed if yesterday’s is not accessible.  And tomorrow’s innovation must wait until today’s innovation is available for use.  Moreover, if the current length of monopoly protection suffices to incentivize today’s innovation, extending the length of protection will do nothing to increase current innovation.  Instead, it will simply delay future innovation with the economy, over time, falling further and further behind with respect to the level of technology it would otherwise have available.

    For additional information regarding this and other related topics, please see:

    • "Congressional Fact-finding on Follow-on Biologics," August 13, 2008
    • "CBO Releases Report on Senate Follow-on Biologics Bill; BIO Calls for Congress to Pass Biologics Bill in 2008," July 1, 2008
    • "Follow-on Biologic Drugs and Patent Law: A Potential Disconnect?" March 25, 2008
    • "New Follow-on Biologics Bill Introduced in the House," March 18, 2008
    • "Dr. Robert Shapiro Discusses Follow-on Biologics Report," February 19, 2008
    • "BIO CEO Provides Update on Patent Reform and Follow-on Biologics Legislation – Part II," February 14, 2008
    • "Biologics Legislation Faces Unresolved Issues," December 28, 2007
    • "Senate Committee Passes Biologics Legislation" July 5, 2007

  •     By Donald Zuhn

    Egenomics
    Earlier this month, eGenomics, Inc. announced that the U.S. Patent and Trademark Office has issued U.S. Patent No. 7,349,808, which is directed to a method for performing real-time infection control by determining the phylogenetic relatedness between sequence data obtained from a microorganism sample isolated in a health care facility with historical sequence data in a database and providing infection control information based on that phylogenetic relatedness.  The ‘808 patent is the first U.S. patent to be awarded to eGenomics, which is also named as an assignee on U.S. Patent Application Publication No. 2008/0206767.

    According to the New York-based biotechnology company’s press release, the ‘808 patent covers eGenomics’ proprietary warning system for hospital infection control in which "fingerprints" for infection-causing bacteria are determined by automated DNA sequencing and then stored in a central database containing over 6,000 analyzed Staphylococcus aureus strains (as well as sequence data from other infectious organisms).  These fingerprints are then analyzed using proprietary algorithms, thereby allowing hospital infection control teams to monitor the spread of specific harmful pathogens in "real time."  The eGenomics system, which differentiates clusters of related microorganism strains in order to identify a source or transmission vector, is currently being used in active surveillance programs at Beth Israel Medical Center in New York, Newark Beth Israel Medical Center, and the VA Medical Center in East Orange, NJ, and by researchers at the Centers for Disease Control and Prevention, Rockefeller University, Duke University Medical Center, Purdue University, and The Institute for Genomic Research (TIGR).

    Kreiswirth_barry_2
    Dr. Barry Kreiswirth (at left), who founded eGenomics with Steve Naidich, believes that the system "should be a major component of every hospitals’ effort to monitor and prevent methycillin-resistant strains of Staphylococcus aureus (MRSA) infections," and noted that eGenomics was in the process of expanding its system to track other common nosocomial, or hospital-acquired, infections.  Dr. Kreiswirth also noted that the eGenomics’ system could be used to reduce the chance of acquiring a nosocomial infection; identify outbreaks and their sources before they become endemic; identify non-outbreaks, allowing hospitals to avoid costly infection control measures; direct more appropriate antibiotic usage, thereby extending the effectiveness of existing antibiotics; lower the costs to control infections; and provide faster and more accurate information than other comparable techniques.

    The ‘808 patent issued from U.S. Application No. 09/656,084, filed September 6, 2000.  Independent claims 1 and 25 of the ‘808 patent recite:

    1.  A method of tracking the spread of infectious bacteria, comprising:
        obtaining a plurality of bacterium samples from a plurality of patients or objects at a plurality of different physical locations;
        performing DNA sequencing on a first region of deoxyribonucleic acid from each bacterium sample, the first region consisting essentially of a variable number of tandem repeats (VNTRs) region;
        storing in a database for each of the plurality of bacterium samples:  a) the nucleotide sequence data from the first sequenced region of each bacterium sample, and b) the physical location of the patient or object from which each bacterium sample was obtained;
        comparing the nucleotide sequence data stored in the database of at least two of the plurality of samples on both a base pair level and a repeat motif level;
        determining a measure of phylogenetic relatedness between the compared samples based upon differences between the compared nucleotide sequence data;
        identifying patients infected or objects contaminated with phylogenetically related bacteria based on the phylogenetic relatedness determination;
        tracking the spread over time of the bacteria based on:  a) the identified patients or contaminated objects, and b) the physical locations of the identified patients or objects stored in the database; and
        providing a warning based on the tracking of the spread of the bacteria wherein the warning allows the recipient of the warning to control the further spread of the bacteria.

    25.  A system for tracking the spread of infectious bacteria, comprising:
        a computer network;
        a centralized database;
        a facility, connected to the computer network, where a plurality of bacterium samples from a plurality of patients or objects at a plurality of different locations are obtained;
        a server connected to the computer network, the server receiving nucleotide sequence data for a first sequenced region of a deoxyribonucleic acid from each of the plurality of bacterium samples and a physical location of a patient or object from which each bacterium sample was obtained, the first sequenced region consisting essentially of a variable number of tandem repeats (VNTRs) region;
        storing in a database for each of the plurality of bacterium samples:  a) the nucleotide sequence data from each of the plurality of bacterium samples, and b) the physical location of the patient or object from which each bacterium sample was obtained;
        accessing the centralized database and comparing the stored nucleotide sequence data of at least two of the plurality of bacterium samples;
        determining a measure of phylogenetic relatedness between the compared samples;
        identifying patients infected or objects contaminated with phylogenetically related bacteria based on the phylogenetic relatedness determination;
        tracking the spread over time of the bacteria based on a) the identified patients or objects, and b) and the physical locations of the identified patients or objects stored in the database; and
        transmitting a warning over the computer network to the facility based on the tracking of the spread of the bacteria, thereby allowing the facility to control further spread of the bacterial infection.

    Fig2a

  •     By Kevin E. Noonan

    Wegner_harold
    Harold Wegner, dean of patent law cognoscenti and a partner at Foley & Lardner LLP in Washington, DC, regaled the audience at ACI’s Biotech Patent Law conference on Monday with a talk on "Key Biotech Cases to Watch and How They May Impact Your Practice."  Ranging from § 101 through injunctive relief, Professor Wegner (at right) not only discussed the cases but handicapped the expected outcomes based on his appraisal of the makeup of the panels hearing the cases (including a few en banc cases).

    These are Professor Wegner’s cases to watch:

    Nuitjen v. Dudas, Supreme Court No. 07-1404
    Biomedical Patent Management Corp. v. State of California, Supreme Court No. 07-956
    In re Bilski, Fed. Cir. No. 2007-1130
    Classen Immunotherapies, Inc. v. Biogen IDEC, Fed. Cir. No. 2006-1634
    Prometheus v. Mayo, Fed. Cir. No. 2008-1403
    Lupin Ltd. v. Abbott Labs., Fed. Cir. No. 2007-1446
    Abbott Labs. v. Sandoz, Inc., Fed. Cir. No. 2007-1400
    Egyptian Goddess, Inc. v. Swisa, Inc., Fed. Cir. No. 2006-152
    In re Kubin, Fed. Cir. No. 2008-1184
    In re Alonso, Fed. Cir. No. 2008-1079

    Supreme_court_building_2
    Two of these cases are on petition for certiorari before the Supreme Court:  Nuitjen v. Dudas and Biomedical Patent Management Corp. v. State of California.  The Nuitjen case involves the question of whether a signal per se is patentable subject matter; its relevance to biotech patent law stems from the nature of the question presented:

    Whether the [ ] Federal Circuit erred by adding new requirements to 35 U.S.C. § 101 that patentable manufactures must be tangible articles that are nontransitory and perceivable without special equipment, thereby denying patent protection to all signals and other important advances in technology that do not meet these requirements, no matter how innovative, unique, or useful they are.

    Professor Wegner suggested that this question might be equally applied to processes occurring in vivo (observable by behavioral or other non-tangible phenotype).  The decision on the petition is expected later this year.

    The Biomedical case involves the issue of sovereign immunity, and the ability of states to benefit from the patent system on the one hand and avoid infringement liability under the 11th Amendment.  Professor Wegner characterized this case as an opportunity to limit Florida Prepaid Postsecondary Education Expense Board v. College Savings Bank, 527 U.S. 627 (1999).  The relevant question presented is as follows:

    Whether a state waives its Eleventh Amendment immunity in patent actions by regularly and voluntarily invoking federal jurisdiction to enforce its own patent rights.

    Federal_circuit_seal
    In re Bilski
    is another statutory subject matter case, awaiting en banc decision expected in October or November (Judge Michel intimated in a speech given last week at Harvard that the decision is forthcoming).  While directed towards patent eligibility of business method patents, the second en banc question posed by the Court asks for opinions on the standard for determining whether a process is patent-eligible, a question having evident relevance to other types of method claims (such as diagnostic methods).

    Diagnostic method claims are once more at issue in two pending cases:  Classen Immunotherapies, Inc. v. Biogen IDEC and Prometheus v. MayoClassen for the first time frames the question under 35 U.S.C. § 101 — the Metabolite Labs. case was argued under the utility requirement of 35 U.S.C. § 112, first paragraph.  The decision is greatly overdue, argument having been heard on August 8, 2007.  The delay might be due to the composition of the panel (including Judge Newman, Judge Moore, and District Court Judge Farnan, sitting by designation from the District of Delaware) — Professor Wegner speculated that Judge Farnan might be the tie-breaker between two Federal Circuit judges whose opinions on the patent-eligibility of diagnostic claims can be expected to be widely divergent.  He also speculated that the panel might be waiting for the en banc Bilski decision before releasing its opinion in Classen.

    The Prometheus case also parallels the facts in Metabolite, this being the claim at issue:

    Claim 1.  A method of optimizing therapeutic efficacy for treatment of an immune mediated gastrointestinal disorder, comprising:
        (a)  administering a drug providing 6-thioguanine . . . ; and
        (b)  determining the level of 6-thioguanine in said subject . . . and
        (c)  wherein the levels of 6-thioguanine greater than about 400 pmol per 8×10(8) red blood cells indicates a need to decrease the amount of said drug subsequently administered to said subject.

    Unlike in Metabolite, however, in this case the district court found the claim to be invalid under 35 U.S.C. § 101.  The district court opined that just because the inventors:

    have framed the claims as "treatment methods" does not make the claims patentable.  Indeed, "one can reduce any process to a series of steps.  The question is what those steps embody."  Lab. Corp. of Am. Holdings v. Metabolite, Inc., 548 U.S. 124 (2006) (Breyer, J., dissenting from dismissal of certiorari) (emphasis in original); see also In re Grams, 888 F.2d 835, 839 (Fed.Cir.1989) (explaining that the critical question is: "What did applicants invent?") (quoting In re Abele, 684 F.2d 902, 907 (C.C.P.A.1982)) . . .[T]he "administering" and "determining" steps are merely necessary data-gathering steps for any use of the correlations.  However, an "unpatentable principle" will not transform into a "patentable process" simply by adding conventional method steps.  . . .  [The [wherein or] "warning" step [in a mental step that] does not require that dosage be adjusted, or any other action.  . . .  [I]t is the metabolite levels themselves that "warn" the doctor that an adjustment in dosage may be required.

    The Lupin case promises to address (if not resolve) a long-standing dispute concerning product-by-process claims:  whether the claim is infringed by sale of a claimed product produced by a different method.  The Scripps Clinic & Research Foundation v. Genentech case (opinion by Judge Newman) held that it would, while Atlantic Thermoplastics Co., Inc. v. Faytex Corp. (opinion by Judge Rader) held that it did not.  The question presented characterized the issue as whether the district court had any discretion to decline to follow the Federal Circuit’s Scripps Clinic precedent (which was the earlier-decided case and thus precedential) in favor of 19th Century Supreme Court precedent (Cochrane v. Badische Anilin & Soda Fabrik).  Since Judge Rader is on the panel (the case was argued on May 7, 2008 before Judges Rader, Plager, and Bryson), the expectation is that the CAFC will decide that the district court was correct in following the Atlantic Thermoplastics and earlier Supreme Court precedent.  Interestingly, the Abbott Labs. case addresses the same issue and was argued before the same panel on the same day as the Lupin case.

    Professor Wegner characterized the questions presented to the Federal Circuit with regard to obviousness in the In re Kubin case (discussed in greater detail here) as follows:

    Whether the Board erred as a matter of law in finding Kubin’s claims obvious where the Board:

    "1) improperly applied an ‘obvious to try’ test for an invention in the field of molecular biology – a field of technology which the Board expressly found was an ‘unpredictable art;’
    "2) lacked substantial evidence to support its finding that one of skill in the art would have had a reasonable likelihood of success in arriving at the claimed DNA molecules using ‘conventional methodologies,’ in the context of the record as a whole;
    "3) disregarded the lack of any structural information available in the art relating to the claimed DNA molecules – not a single polynucleotide encoding even a portion of the recited NAIL-peptide was known in the art;
    "4) dismissed, as no longer binding or applicable law, this Court’s prior decisions regarding the analysis of 35 U.S.C. §103 in the context of isolated DNA molecules, including [In re Deuel, 51 F.3d 1552 (Fed. Cir. 1995)]; and
    "5) failed to consider the claimed subject matter as a whole by completely ignoring claim limitations regarding the newly discovered ability of NAIL-peptides to bind to a ligand, CD48."

    Regarding written description (the other aspect of the Board’s decision on appeal in Kubin), the questions are:

    Whether substantial evidence supports the Board’s finding that Appellants did not possess the full scope of their claimed invention under 35 U.S.C. § 112 (written description requirement) where Appellants:

    "1) disclosed a functional characteristic, CD48-binding, common to members of the claimed genus, correlated with a structure that was sufficiently disclosed;
    "2) disclosed a representative number of DNA molecules within the scope of the claims; and
    "3) recited structural features, the nucleotide sequence of the claimed binding region, common to the genus and which constitute a substantial portion of the genus."

    The Patent Office brief was due last Friday, and seven amici have filed briefs in the Kubin case, which has not been docketed for argument.

    The In re Alonso case concerns the written description requirement and was argued before the CAFC on September 2nd.  The invention relates to a genus of antibodies that bind and attack neurofibrosarcomas, and the Board determined that the specification did not disclose a sufficient number of species to satisfy the requirement for the genus under Regents of the University of California v. Eli Lilly and Company and University of Rochester v. G.D. Searle & Co.  Alonso argued that tumor cell binding was a common functional feature that is evidence that the different antibody members of the genus "will necessarily have common structural features," and that the Board did not properly consider this in applying the legal standard for written description.

    Professor Wegner also noted that the Egyptian Goddess case, although concerning design patents, might contain dicta relating to obviousness in utility patents.

    Professor Wegner ended his talk with a brief overview of the proposed "improper Markush group" rules, which he noted had not been formally implemented but seemed to have been formally adopted in certain art units.  He excoriated as improper the use of these new "rules" being applied "ad hoc" to deny generic claim coverage to linking claims, by Examiner’s requiring the claims to be withdrawn responsive to a restriction/election requirement.  Citing a variety of CCPA and CAFC cases, the Professor stated that the law was clear that a generic claim (whether in Markush format or otherwise) must be examined provided that it includes 1) a common structural nucleus and 2) all compounds "contemplated by the Markush group" have at least one utility in common.  He also graciously provided a "blueprint" for overcoming these rejections, an article entitled "The Right to Generic Chemical Coverage," 6 APLA Quart. J. 257 (1978).

  •     By Donald Zuhn

    Allele_biotechnology
    Last week, Allele Biotechnology & Pharmaceuticals, Inc. announced that the U.S. Patent and Trademark Office has issued U.S. Patent No. 7,422,896, which is directed to DNA compositions that mediate RNA interference (RNAi) gene silencing, wherein the DNA compositions include an RNA polymerase III promoter that drives the expression of a nucleotide sequence encoding an intermediate small interfering RNA (siRNA) molecule, and RNA polymerase III terminator.  The ‘896 patent is the second U.S. patent to be awarded to Allele Biotech, which is also named as an assignee on U.S. Patent Application Publication No. 2005/0042603.

    According to the San Diego-based biotechnology company’s press release, the ‘896 patent supplements a patent that was issued to Allele Biotech last year (U.S. Patent No. 7,294,504) by describing additional ways of using RNA polymerase III and its promoters to express siRNA or shRNA (small or short hairpin DNA) in human and other mammalian systems.  The ‘896 patent covers Allele Biotech’s LineSilence and SilenCircle (see below; "Method Overview" from SilenCircle Complete RNAi Kit brochure) platforms, which in contrast to traditional synthetic siRNA platforms, utilize DNA constructs encoding siRNA or shRNA molecules to allow for the induction of RNAi inside target cells.  Allele Biotech President and CEO Dr. Jiwu Wang noted that the ‘896 and ‘504 patents put the company "in a unique position for co-development in the RNAi research tool and therapeutic fields."

    Silencircle

    The ‘896 patent issued from U.S. Application No. 10/217,564, filed August 12, 2002, which is a continuation-in-part of U.S. Application No. 10/202,479, filed July 23, 2002, which issued as the ‘504 patent, and which claims the benefit of U.S. Provisional Application No. 60/343,697, filed December 27, 2001.  Independent claim 1 of the ‘896 patent recites:

    1.  A DNA-mediated silencing of gene (DMSG) cassette, comprising, in operative linkage, a distal sequence element (DSE), an RNA polymerase III (pol III) promoter, an expressible template nucleotide sequence, and at least one pol III terminator,
        wherein the terminator comprises SEQ ID NO:50,
        wherein the DSE is about -79 to -72 nucleotides upstream of the expressible template nucleotide sequence,
        wherein the expressible template nucleotide sequence is heterologous with respect to the pol III promoter,
        wherein the expressible template nucleotide sequence consists of at least about 16 nucleotides encoding an intermediate small interfering ribonucleic acid (RNA) molecule (siRNA), which mediates RNA interference of a target RNA, said intermediate siRNA comprising:
        a)  a 5′ portion, which comprises at least about 15 nucleotides complementary to a sense strand of the target RNA, and, optionally,
        a 3′ terminal portion, comprising about 1 to 5 nucleotides,
        wherein the intermediate siRNA selectively hybridizes to the sense strand of the target RNA; or
        b)  a 5′ portion, which comprises at least about 15 nucleotides complementary to an antisense strand of the target RNA, and, optionally,
        a 3′ terminal portion, comprising about 1 to 5 nucleotides,
        wherein the intermediate siRNA selectively hybridizes to the antisense strand of the target RNA, and wherein the encoded intermediate siRNA does not activate PKR in a mammalian cell.

  •     By Sherri Oslick

    Gavel
    About
    Court Report:  Each week we will report briefly on recently filed
    biotech and pharma cases, and a few interesting cases will be selected
    for periodic monitoring.


    University of Iowa et al. v. Amgen, Inc. et al.

    3:08-cv-00112; filed September 8, 2008 in the Southern District of Iowa

    Infringement of U.S. Patent Nos. 5,168,062 ("Transfer Vectors and Microorganisms Containing Human Cytomegalovirus Immediate-Early Promoter-Regulatory DNA Sequence," issued December 1, 1992) and 5,285,839 based on Amgen’s manufacture and sale of Enbrel® and Vectibix® (etanercept, used to treat arthritis, and panitumumab, used to treat colon cancer, respectively).  View the complaint here.  [Ed.:  As noted by a Patent Docs reader, while the complaint lists U.S. Patent No. 5,285,839 ("Internal combustion engine and method for making same"), plaintiffs likely intended to list U.S. Patent No. 5,385,839 ("Transfer Vectors and Microorganisms Containing Human Cytomegalovirus Immediate-Early Promoter-Regulatory DNA Sequence," issued January 31, 1995) instead.]


    Ortho-McNeil Janssen Pharmaceuticals, Inc. v. Amneal Pharmaceuticals

    2:08-cv-04494; filed September 5, 2008 in the District Court of New Jersey

    Infringement of U.S. Patent No. RE39,221 ("Composition Comprising a Tramadol Material and Acetaminophen and Its Use," issued August 1, 2006) following a Paragraph IV certification as part of Amneal’s filing of an ANDA to manufacture a generic version of Ortho-McNeil’s Ultracet® (tramadol hydrochloride and acetaminophen, used to treat acute pain).  View the complaint here.

  • Calendar
    September 15-16, 2008 – Biotech Patents*** (American Conference Institute)

    September 16, 2008 – The Legacy of Judge Howard T. Markey*** (The Center for Intellectual Property Law, John Marshall Law School) – Chicago, IL

    September 21-23, 2008 – 2008 Annual Meeting (Intellectual Property Owners Association) – San Diego, CA

    September 22-23, 2008 – FDA Boot Camp*** (American Conference Institute)

    September 22-23, 2008 – Patent Litigation 2008 (Practising Law Institute) – San Francisco, CA

    September 22-23, 2008 – 2008 World Stem Cell Summit (Genetics Policy Institute) – Madison, WI

    September 23-24, 2008 – Biotech Patenting (C5) – London, England

    October 6-7, 2008 – Patent Litigation 2008 (Practising Law Institute) – McLean, VA

    October 7-8, 2008 – Global Patent Litigation*** (American Conference Institute) – New York, NY

    October 15, 2008 – Developments in Pharmaceutical and Biotech Patent Law (Practising Law Institute) – San Francisco, CA

    October 15-16, 2008 – Pharmaceutical Congress on Paragraph IV Disputes*** (Center for Business Intelligence) – Philadelphia, PA

    October 15-16, 2008 – Advanced Courses (Patent Resources Group) – Santa Ana Pueblo, NM

    October 15-17, 2008 – Maximizing Pharmaceutical Patent Lifecycles*** (American Conference Institute) – New York, NY

    October 23-24, 2008 – Patent Litigation 2008 (Practising Law Institute) – Chicago, IL

    October 28-29, 2008 – Pharma/Biotech IP Due Diligence*** (C5) – Amsterdam, Netherlands

    November 10-11, 2008 – Patent Litigation 2008 (Practising Law Institute) – Atlanta, GA

    November 12-14, 2008 – Structuring, Negotiating and Managing Pharma/Biotech Collaborative Agreements (American Conference Institute) – New York, NY

    November 17-18, 2008 – Pharmaceutical and Biotech Patent Opinion Writing*** (American Conference Institute) – Boston, MA

    November 17-18, 2008 – Patent Litigation 2008 (Practising Law Institute) – New York, NY

    November 19-20, 2008 – Paragraph IV on Trial*** (American Conference Institute) – New York, NY

    December 8-9, 2008 – Pharmaceutical and Biotech Patent Opinion Writing*** (American Conference Institute) – Atlanta, GA

    January 12-13, 2009 – Pharmaceutical and Biotech Patent Opinion Writing*** (American Conference Institute) – San Diego, CA

    ***Patent Docs is a media partner of this conference or CLE

  •     By Donald Zuhn

    Last month, we reported on the lobbying expenditures for fourteen biotech and pharma companies and organizations in the second quarter of 2008.  Recent news reports have allowed us to add four more companies to the list:

    Sanofiaventis_large
    • Sanofi-Aventis’ U.S. subsidiary spent more than $1.2 million on second quarter lobbying (see Forbes.com report).  According to Sanofi-Aventis’ July 18 filing with the House clerk’s office, the drugmaker’s lobbying efforts were directed in part at follow-on biologics legislation.  In addition, the company’s vaccine division spent $460,000 lobbying in part on patent reform.

    Teva_1
    • Teva Pharmaceutical Industries Inc. spent $490,000 on second quarter lobbying (see Forbes.com report).  According to Teva’s July 18 filing with the House clerk’s office, the generic drugmaker’s lobbying efforts were directed in part at patent reform and follow-on biologics legislation.

    Allergan
    • Allergan Inc. spent $410,000 on second quarter lobbying (see Forbes.com report).  According to Allergan’s July 21 filing with the House clerk’s office, the biotech company’s lobbying efforts were directed in part at follow-on biologics legislation.

    Watson_pharmaceuticals
    • Watson Pharmaceuticals Inc. spent $230,000 on second quarter lobbying (see Forbes.com report).  According to Watson’s July 21 filing with the House clerk’s office, the generic drugmaker’s lobbying efforts were directed in part at follow-on biologics legislation.

    Patent Docs readers are reminded that in our previous report, we also highlighted the lobbying esxpenditures of a number of IT companies and organizations as a point of comparison with the the lobbying expenses of various members of the biotech/pharma industry (see "Biotech/Pharma Lobbying Scoreboard – Second Quarter Update").

    For additional information regarding this topic, please see:

    • "Biotech/Pharma Lobbying Scoreboard – Second Quarter Update," August 21, 2008
    • "Biotech/Pharma Lobbying Scoreboard – Part II," June 30, 2008
    • "Biotech/Pharma Lobbying Scoreboard" June 6, 2008
    • "Lobbying Spending Spree Continues," May 20, 2008
    • "Abbott’s First Quarter Lobbying Tab Hits $880,000," May 2, 2008

  •     By Donald Zuhn

    Uspto_seal_no_background_2
    On June 10, 2008, the U.S. Patent and Trademark Office published a notice in the Federal Register setting forth amended rules of practice before the Board of Patent Appeals and Interferences (BPAI) in ex parte appeals (see "New Appeals Rules Published").  What escaped the attention of the patent community at the time, however, was the Patent Office’s publication of a notice one day earlier requesting comments from the public on the Office’s estimates for additional burdens imposed on applicants by the new appeals rules (see "USPTO Rulemaking Practices Being Called into Question (Again)").  The earlier Federal Register publication had gone unnoticed because the Patent Office had not listed the notice on its website (see the "Federal Register Notices" column on the "News and Notices" page of the USPTO website) or any other forum for notifying the public.  This marked a departure from the Office’s recent practice of posting such notices on its website.  In fact, the Office published a similar notice regarding the alternative claiming rules earlier this year (see "Patent Office Publishes Notice Regarding Impact of Proposed Markush Claims Rules on Small Entities" and "You Can’t Fight the USPTO — or Can You?").

    Boundy_david
    In late July, when David Boundy (at left) of Cantor Fitzgerald alerted us to the June 9th notice, we wondered whether the Office’s failure to post the notice on its website evinced an intention to reduce the amount of public participation in the Office of Management and Budget’s (OMB) Paperwork Reduction Act (PRA) review of the new appeal rules, or whether the Office had merely dropped the ball.  While this question still awaits a satisfactory answer, Mr. Boundy informed us earlier this week that the Patent Office has now posted the comments it received in response to the June 9th notice.  The twelve comments (Mr. Boundy’s second submission was intended to replace the first) can be found at the Office’s "Paperwork Reduction Act" page.  (Interestingly, Mr. Boundy noted that instead of being posted in an expected location on the USPTO website — the "Comments from the Public" page — the comments were posted on a separate page containing requests for comments to eight recent notices.  In view of the Office’s June 9th hide-the-ball request for comments, the manner in which these comments were posted is perhaps not entirely surprising.)

    Mr. Boundy offered a brief review of the submitted comments (which was helpful, since his own submission runs 206 pages in length).  While noting that the comments from Heimlich (comment #9) and Badley (comment #2) were interesting for their empirical data, Mr. Boundy found the comments of Katznelson (comment #11) and Dunne (comment #6) (as well as his own submission) to be interesting because of "their exposition of the methodological flaws and pervasive disregard for the rule of law by the Patent Office."  Mr. Boundy has promised to provide a more extensive review of the submitted comments after he has had a chance to review them in more detail.

    For now, however, Mr. Boundy notes that "[i]f the PTO acquiesces to following the law, its only two options are to either (a) withdraw the Appeal Rule and simply let it die, or (b) withdraw the December 12 effective date for the Appeal Rule, and proceed . . . with a new Notice of Proposed Rulemaking and a concurrent submission to OMB under the Paperwork Reduction Act," since 5 C.F.R. § 1320.11 requires that the Administrative Procedure Act (APA) notice and comment period and the PRA 60-day comment period be essentially concurrent.  Having little faith that the Office will choose one of the above options, Mr. Boundy instead expects the Patent Office "to continue its pattern of the last two years of improvising procedure as it goes along . . . and ignoring any law it finds inconvenient," and therefore, he predicts that "the PTO will pretend that all preliminary steps were timely completed and approved, and will pretend that it can submit the Appeal Rule to OMB for a 30-day review."

    Mr. Boundy believes that it is important that the Patent Office not be allowed to ignore Executive Office regulations by doing this, and has asked interested members of the patent community to pay attention to the Office’s Federal Register notices over the next few weeks to see if the Office issues any follow-on announcement regarding the PRA review of the new appeal rules.  If the Office decides to bypass such regulations, Mr. Boundy recommends that those in the patent community contact Susan Dudley, the head of the Office of Information and Regulatory Affairs at the OMB; David Rostker, the Desk Officer for the Department of Commerce; and the OMB official to be named in any future USPTO notice, to request that the OMB deny the Patent Office’s request for paperwork approval, and "compel the PTO to simply follow the law like every other agency."  Patent Docs will provide additional information on this issue, if (or when) the Patent Office takes the path predicted by Mr. Boundy.

  •     By Kevin E. Noonan

    Over the past year, the Federal Circuit has addressed on many occasions the scope of the "case or controversy" requirement for a court to have jurisdiction under Article III of the Constitution.  Several of these decisions have been directed to the proper jurisdictional scope of declaratory judgment actions filed in ANDA cases, where a generic drug company has filed its ANDA on a drug having at least one patent listed by the innovator in the FDA Orange Book.  These cases include Caraco Pharmaceutical Laboratories, Ltd. v. Forest Laboratories, Inc. and Merck & Co. v. Apotex, Inc.  Continuing this trend is the Court's decision, issued last Thursday, in Janssen Pharaceutica, N.V. v. Apotex, Inc.

    Janssen_pharmaceutica
    The dispute arose over Janssen's branded antipsychotic drug Risperdal®, having three patents listed in the Orange Book:  U.S. Patent No. 4,804,663 on the risperidone compound itself; U.S. Patent No. 5,453,425 on aqueous solutions of risperidone (Risperdal® is an oral solution of risperidone), and U.S. Patent No. 5,616,587 for methods of making said aqueous solutions.  Teva was the first generic company to file an ANDA on Risperdal®; its ANDA contained a Paragraph III certification on the '663 patent (wherein Teva deferred approval of its ANDA until the '663 patent expired); Janssen did not file suit against Teva on the '425 or the '587 patents.  As the first ANDA filer, Teva was thus entitled to a 180-day exclusivity period, which would begin on June 29, 2008 (a date six months after the expiration date of the '663 patent due to an additional six-month pediatric exclusivity period; see Patent Docs report on Merck & Co. cases).

    Apotex_1
    Apotex filed its ANDA several years after Teva, and initially filed Paragraph IV certifications on the '425 and 587 patents; in January 2006, Apotex filed a Paragraph IV certification on the '663 patent.  This provoked Janssen to file suit pursuant to 35 U.S.C. § 271(e)(4); Janssen did not sue Apotex on the '425 and '587 patents.  Apotex responded to Janssen's suit with counterclaims for a declaratory judgment on non-infringement of these two unasserted patents.  Janssen granted Apotex a covenant not to sue on the '425 and '587 patents, and Apotex stipulated that the '663 patent was not invalid or unenforceable and infringed by its ANDA.  Despite this, Apotex refused to withdraw its counterclaims, and the District Court on Janssen's motion dismissed for lack of subject matter jurisdiction.

    Risperdal
    The Federal Circuit affirmed, in an opinion written by Judge Moore and joined by Judge Rader and Chief Judge Michel.  In its opinion, the Court addressed the three grounds Apotex asserted in support of jurisdiction:  first, that  it would be unable to promptly launch its product upon expiration of the '663 patent; second, that FDA approval of its product was being "indefinitely delayed"; and third, that the covenant not to sue did not protect its upstream suppliers or downstream customers.  The Court found no merit in any of these arguments.

    Apotex's first argument was based on the advantages it might obtain should the '425 and '587 patents be invalidated.  Under the Hatch-Waxman regime, as amended by Title XI of the Medicare Prescription Drug, Improvement and Modernization Act of 2003, Pub. L. No. 108-173, § 1102(a), 117 Stat. 2066, 2457-60, Teva's 180-day exclusivity would be triggered either by (1) Teva's first sale of generic risperidone or (2) invalidation of the '425 and '587 patents.  Should Apotex be able to invalidate these unasserted patents prior to Teva's ANDA approval date (i.e., June 29, 2008), the 180-day period would begin before Teva could launch its generic product.  Thus, if properly timed, Apotex would be able to launch its product as early as the end of the pediatric exclusivity period; otherwise, the earliest Apotex could launch would be 180 days after the end of the pediatric exclusivity period (during which time, significantly, Teva would be the exclusive generic risperidone product on the market).

    Apotex argued that the Court's decision in Caraco Pharmaceutical Laboratories, Ltd. v. Forest Laboratories, Inc. was controlling.  In the Caraco case, innovator Forest listed two patents in the Orange Book, but sued first ANDA filer Ivax on only one of them; this patent was found not invalid or unenforceable and infringed.  When Caraco filed its subsequent ANDA, Forest filed suit only on the same, previously-litigated patent, and granted Caraco a covenant not to sue on the unasserted patent.  The Court noted that in the Caraco case, finding jurisdiction would permit Caraco to obtain a declaratory judgment on both patents, which (like here) would trigger the 180-day exclusivity period for the first ANDA filer (Ivax).  However, the Court noted that in the Caraco case, triggering Ivax's exclusivity period would permit Ivax to launch at an earlier time and thus allow Caraco to obtain its own FDA approval at an earlier time, resulting in increased competition at an earlier time.  Without the declaratory judgment, Caraco would be excluded from entering the marketplace even if the asserted patent was found to be invalid or unenforceable.

    Federal_circuit_seal_2
    The Federal Circuit contrasted the situation before it with Caraco, because here Apotex stipulated the validity of  the '663 patent, which was the impediment to first ANDA filer Teva obtaining FDA approval, launching its product, and triggering its 180-day exclusivity period.  The Court said that the harm to Apotex stemmed directly from Teva's 180-day exclusivity period, which prevented Apotex from entering the market, and that the timing of this exclusivity period depended on the validity, enforceability, and infringement of the '663 patent, to which Apotex had stipulated.  Moreover, the Court held that the mere existence of Teva's 180-day exclusivity period did not raise a case or controversy under Article III because that period was expressly contained in the statute "as an incentive to challenge suspect Orange Book listed patents."  The statute expressly provides this period of exclusivity, which the Court said was "important to generic pharmaceutical companies as it promotes patent challenges by enabling a generic company a period to recover its investment in these challenges."  Thus, the Court rejected Apotex's first argument in support of jurisdiction because the 180-day exclusivity period was a legitimate part of the statutory scheme and the intent of Congress to "balance [the] two competing interests in the pharmaceutical industry: '(1) inducing pioneering research and development of new drugs and (2) enabling competitors to bring low-cost, generic copies of those drugs to market.'"

    Apotex next argued that it was subject to indefinite delay in launching its product, because while Teva's exclusivity period could begin on June 29, 2008, Teva was not compelled to launch on that date; indeed, the parties stipulated that Teva had not launched as of the date of the oral hearing, July 7, 2008.  Looking at the timing of the events in the District Court below, the Federal Circuit said that on the date the District Court entered final judgment, November 2, 2007, Apotex's claim that Teva might unduly delay launching its product, and triggering its 180-day exclusivity period, past June 29, 2008, was too uncertain and speculative to support declaratory judgment jurisdiction.  The Court stated that this result was consistent with its Caraco decision, as well as Supreme Court precedent, including Medimmune, Inc. v. Genentech, Inc., which required that a dispute must be "definite and concrete" and "real and substantial" to support the exercise of a district court's subject matter jurisdiction.  Citing Prasco, LLC, the Federal Circuit said that Medimmune ""did not change the bedrock rule that a case or controversy must be based on a real and immediate injury . . . an objective standard that cannot be met by a purely subjective or speculative fear of future harm."

    Finally, the Federal Circuit rejected Apotex's third argument on appeal, that the covenant not to sue did not protect the upstream suppliers or downstream customers.  The Court found the suppliers protected by the express language of the covenant, that Janssen would not sue Apotex for "manufacturing" or "having manufactured" infringing risperidone formulations; the term "having manufactured," in the Court's view, expressly encompassed "all suppliers and affiliates involved in the manufacturing process."  As for Apotex's customers, the Court found that the covenant contained language that "Janssen would not sue or otherwise seek to hold Apotex's customers and distributors liable."  Thus, the Court found that by its express terms the covenant not to sue protected not only Apotex but its suppliers and customers.

    Janssen Pharmaceutica, N.V. v. Apotex, Inc. (Fed. Cir. 2008)
    Panel: Chief Judge Michel and Circuit Judges Rader and Moore
    Opinion by Circuit Judge Moore